JSci.instruments
Class PTCroquette

java.lang.Object
  JSci.instruments.ImageFilterAdapter
      JSci.instruments.PTCroquette

All Implemented Interfaces:

Control, Dimensions, ImageFilter, ImageSink, ImageSource, ParticleTracker, ROI

public class PTCroquette
extends ImageFilterAdapter
implements ParticleTracker, ROI

an Effect that does the particle tracking in 3D, for symmetric images

Field Summary

static int	CALIBR_AVR While calibrating, averages this number of frames
static double	CALIBR_STEP Steps in z for calibration (microns)
static int	CROSS_H Width of the arms of the cross
static int	CROSS_L Length of the arms of the cross

Constructor Summary

PTCroquette(PositionControl p)

Method Summary

void	filter(Image f) processes a frame.
java.awt.Component	getFilterControlComponent() defines the Component that controls this filter
java.lang.String	getName() defines the name of the filter
java.awt.Shape	getShape()
static void	main(java.lang.String[] args)
void	paint(java.awt.Graphics g) Called by the Player: draw the ROI
void	setComponent(java.awt.Component c) Set the component that displays the image, so that the crosses can be moved with the mouse.
void	setListener(ParticleTrackerListener ptl) Sets the object that wants to receive the data collected by the particle tracker.

Methods inherited from class JSci.instruments.ImageFilterAdapter

getControlComponent, getHeight, getSize, getWidth, receive, setSink, setSource

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface JSci.instruments.ImageSource

setSink

Methods inherited from interface JSci.instruments.Dimensions

getHeight, getSize, getWidth

Methods inherited from interface JSci.instruments.ImageSink

receive, setSource

Methods inherited from interface JSci.instruments.Control

getControlComponent

Field Detail

CROSS_L

public static int CROSS_L

Length of the arms of the cross

CROSS_H

public static int CROSS_H

Width of the arms of the cross

CALIBR_STEP

public static double CALIBR_STEP

Steps in z for calibration (microns)

CALIBR_AVR

public static int CALIBR_AVR

While calibrating, averages this number of frames

Constructor Detail

PTCroquette

public PTCroquette(PositionControl p)

Parameters:

p - the device that will control the motion of the microscope

Method Detail

getName

public java.lang.String getName()

Description copied from class: ImageFilterAdapter

defines the name of the filter

Overrides:

getName in class ImageFilterAdapter

setListener

public void setListener(ParticleTrackerListener ptl)

Description copied from interface: ParticleTracker

Sets the object that wants to receive the data collected by the particle tracker.

Specified by:

setListener in interface ParticleTracker

Parameters:

ptl - the object that receives the data; each time a new image is processed, ptl.receivePosition() is called.

filter

public void filter(Image f)

processes a frame. Do not call this directly.

Specified by:

filter in class ImageFilterAdapter

Parameters:

f - the image that must be processed

getShape

public java.awt.Shape getShape()

Specified by:

getShape in interface ROI

Returns:

the Shape of the ROI

paint

public void paint(java.awt.Graphics g)

Description copied from interface: ROI

Called by the Player: draw the ROI

Specified by:

paint in interface ROI

Parameters:

g - the Graphics where to paint the ROI

setComponent

public void setComponent(java.awt.Component c)

Set the component that displays the image, so that the crosses can be moved with the mouse.

Specified by:

setComponent in interface ROI

Parameters:

c - the component from which we want to get the mouse actions

getFilterControlComponent

public java.awt.Component getFilterControlComponent()

Description copied from class: ImageFilterAdapter

defines the Component that controls this filter

Overrides:

getFilterControlComponent in class ImageFilterAdapter

Returns:

the component with controls for the effect

main

public static void main(java.lang.String[] args)